{
  "_id": "6ad29db82c5c76d3dd0c92c9",
  "Package": "locfdr",
  "Version": "1.1-9",
  "Title": "Computes Local False Discovery Rates",
  "Authors@R": "c(person(\"Bradley\", \"Efron\", role=c(\"aut\"),\nemail = \"brad@stat.Stanford.EDU\"),\nperson(\"Brit\", \"Turnbull\", role=c(\"aut\")),\nperson(\"Balasubramanian\", \"Narasimhan\", role=c(\"aut\", \"cre\"),\nemail = \"naras@stat.Stanford.EDU\"),\nperson(\"Korbinian\", \"Strimmer\", role=c(\"ctb\")))",
  "License": "GPL-2",
  "Encoding": "UTF-8",
  "VignetteBuilder": "knitr",
  "LazyData": "true",
  "Description": "Computation of local false discovery rates.",
  "NeedsCompilation": "no",
  "RoxygenNote": "7.3.3",
  "Repository": "https://bnaras.r-universe.dev",
  "Date/Publication": "2026-04-09 18:58:09 UTC",
  "RemoteUrl": "https://github.com/bnaras/locfdr",
  "RemoteRef": "HEAD",
  "RemoteSha": "4a017db142f3da61f98a9265de1bf0a8a74ffd24",
  "Packaged": {
    "Date": "2026-10-16 21:48:29 UTC",
    "User": "root"
  },
  "Author": "Bradley Efron [aut],\nBrit Turnbull [aut],\nBalasubramanian Narasimhan [aut, cre],\nKorbinian Strimmer [ctb]",
  "Maintainer": "Balasubramanian Narasimhan <naras@stat.Stanford.EDU>",
  "_user": "bnaras",
  "_type": "src",
  "_file": "locfdr_1.1-9.tar.gz",
  "_fileid": "https://r2.ropensci.org/33bfcda4a0b6091ab7c858d06307e8de658dbc5516f110d8ab5bc38562bc8485",
  "_filesize": 320754,
  "_sha256": "33bfcda4a0b6091ab7c858d06307e8de658dbc5516f110d8ab5bc38562bc8485",
  "_expires": "2027-01-24T21:57:10.000Z",
  "_created": "2026-10-16T21:48:29.000Z",
  "_published": "2026-10-16T21:57:12.461Z",
  "_buildurl": "https://github.com/r-universe/bnaras/actions/runs/38971535135",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_jobs": [
    {
      "job": 117211851834,
      "time": 102,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12077711862"
    },
    {
      "job": 117211851932,
      "time": 97,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12077082663"
    },
    {
      "job": 117211852022,
      "time": 101,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "12076834064"
    },
    {
      "job": 117211852031,
      "time": 86,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12077102572"
    },
    {
      "job": 117210925501,
      "time": 155,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12076847784"
    },
    {
      "job": 117211851823,
      "time": 78,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "12077661940"
    },
    {
      "job": 117211851920,
      "time": 65,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12077770103"
    },
    {
      "job": 117211851892,
      "time": 139,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "12076384904"
    },
    {
      "job": 117211851986,
      "time": 64,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12076294979"
    }
  ],
  "_upstream": "https://github.com/bnaras/locfdr",
  "_commit": {
    "id": "4a017db142f3da61f98a9265de1bf0a8a74ffd24",
    "author": "Balasubramanian Narasimhan <b.naras@gmail.com>",
    "committer": "Balasubramanian Narasimhan <b.naras@gmail.com>",
    "message": "Roxygenize package; export locmle/loccov/loccov2; convert vignette to Rmd\n\n- Add roxygen2 headers to all functions, generate NAMESPACE and man pages\n- Export locmle(), loccov(), loccov2() (previously internal only)\n- Add R/data.R for dataset documentation\n- Convert Sweave vignette to Rmd with knitr\n- Add GitHub Actions CI workflow (macOS/Ubuntu/Windows)\n- Add LazyData: true, Encoding: UTF-8\n- R CMD check --as-cran passes with Status: OK\n",
    "time": 1775761089
  },
  "_maintainer": {
    "name": "Balasubramanian Narasimhan",
    "email": "naras@stat.stanford.edu",
    "login": "hrpcisd",
    "description": "",
    "uuid": 10241099
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "splines",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "tinytest",
      "role": "Suggests"
    }
  ],
  "_owner": "bnaras",
  "_selfowned": true,
  "_usedby": 14,
  "_updates": [
    {
      "week": "2026-15",
      "n": 4
    }
  ],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "bnaras",
      "count": 4,
      "uuid": 3030361
    }
  ],
  "_userbio": {
    "uuid": 3030361,
    "type": "user",
    "name": "Balasubramanian Narasimhan",
    "followers": 73
  },
  "_downloads": {
    "count": 5724,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/locfdr"
  },
  "_mentions": 30,
  "_devurl": "https://github.com/bnaras/locfdr",
  "_searchresults": 210,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/locfdr.html",
    "extra/manual.pdf",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_realowner": "hrpcisd",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0",
      "date": "2004-08-19"
    },
    {
      "version": "1.0-1",
      "date": "2004-10-20"
    },
    {
      "version": "1.0-2",
      "date": "2005-04-22"
    },
    {
      "version": "1.0-3",
      "date": "2005-08-05"
    },
    {
      "version": "1.1-1",
      "date": "2006-08-03"
    },
    {
      "version": "1.1-2",
      "date": "2006-08-19"
    },
    {
      "version": "1.1-3",
      "date": "2006-12-19"
    },
    {
      "version": "1.1-4",
      "date": "2007-04-04"
    },
    {
      "version": "1.1-5",
      "date": "2007-08-27"
    },
    {
      "version": "1.1-6",
      "date": "2009-02-19"
    },
    {
      "version": "1.1-7",
      "date": "2011-02-23"
    },
    {
      "version": "1.1-8",
      "date": "2015-07-14"
    }
  ],
  "_exports": [
    "loccov",
    "loccov2",
    "locfdr",
    "locmle"
  ],
  "_datasets": [
    {
      "name": "hivdata",
      "title": "HIV Gene Expression Data",
      "object": "hivdata",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "lfdrsim",
      "title": "Simulated Data for locfdr",
      "object": "lfdrsim",
      "class": [
        "data.frame"
      ],
      "fields": [
        "mu",
        "zex"
      ],
      "rows": 2000,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "hivdata",
      "title": "HIV Gene Expression Data",
      "topics": [
        "hivdata"
      ]
    },
    {
      "page": "lfdrsim",
      "title": "Simulated Data for locfdr",
      "topics": [
        "lfdrsim"
      ]
    },
    {
      "page": "loccov",
      "title": "Covariance Calculations for Local FDR",
      "topics": [
        "loccov"
      ]
    },
    {
      "page": "loccov2",
      "title": "Covariance Calculations for Central Matching Null",
      "topics": [
        "loccov2"
      ]
    },
    {
      "page": "locfdr",
      "title": "Local False Discovery Rate Calculation",
      "topics": [
        "locfdr"
      ]
    },
    {
      "page": "locmle",
      "title": "Maximum Likelihood Estimation for Null Distribution Parameters",
      "topics": [
        "locmle"
      ]
    }
  ],
  "_readme": "https://github.com/bnaras/locfdr/raw/HEAD/README.md",
  "_rundeps": [],
  "_vignettes": [
    {
      "source": "locfdr-example.Rmd",
      "filename": "locfdr-example.html",
      "title": "Local FDR",
      "author": "Bradley Efron, Brit B. Turnbull and Balasubramanian Narasimhan",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Description and Usage",
        "Arguments",
        "zz",
        "bre",
        "df",
        "pct",
        "pct0",
        "nulltype",
        "type",
        "plot",
        "mult",
        "mlests",
        "main",
        "sw",
        "Value",
        "fdr",
        "fp0",
        "Efdr",
        "cdf1",
        "mat",
        "z.2",
        "call",
        "pds",
        "x",
        "f",
        "pds.",
        "stdev",
        "Simulation Example",
        "References"
      ],
      "created": "2026-04-09 18:58:09",
      "modified": "2026-04-09 18:58:09",
      "commits": 1
    }
  ],
  "_score": 7.402138214555578,
  "_indexed": false,
  "_nocasepkg": "locfdr",
  "_universes": [
    "bnaras"
  ],
  "_indexurl": "https://hrpcisd.r-universe.dev/locfdr",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.1-9",
      "date": "2026-10-16T21:50:09.000Z",
      "distro": "resolute",
      "commit": "4a017db142f3da61f98a9265de1bf0a8a74ffd24",
      "fileid": "https://r2.ropensci.org/68d1517518d46e181bbde37cab6c89a239b61226822ec355af25322f4930db3a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bnaras/actions/runs/38971535135"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.1-9",
      "date": "2026-10-16T21:50:05.000Z",
      "distro": "resolute",
      "commit": "4a017db142f3da61f98a9265de1bf0a8a74ffd24",
      "fileid": "https://r2.ropensci.org/5976dd65263efb7c19660c7bbdc2b1101ba47af1098d65dcc15dd1dc054bcf09",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bnaras/actions/runs/38971535135"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.1-9",
      "date": "2026-10-16T21:56:38.000Z",
      "commit": "4a017db142f3da61f98a9265de1bf0a8a74ffd24",
      "fileid": "https://r2.ropensci.org/228e184e9c1cc2e689297286bb1bd7c1acfe243a114d530e1c0da1276a66ddf8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bnaras/actions/runs/38971535135"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.1-9",
      "date": "2026-10-16T21:55:02.000Z",
      "commit": "4a017db142f3da61f98a9265de1bf0a8a74ffd24",
      "fileid": "https://r2.ropensci.org/9f5ad441fcf930aafa5c4d602bc93881945c1dbfd643f92e0554ab5596102e54",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bnaras/actions/runs/38971535135"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.1-9",
      "date": "2026-10-16T21:50:00.000Z",
      "commit": "4a017db142f3da61f98a9265de1bf0a8a74ffd24",
      "fileid": "https://r2.ropensci.org/e7a18c693fd10819a0849036edc9ed041ce8ee5798816c2360318ad62f5a3f25",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bnaras/actions/runs/38971535135"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.1-9",
      "date": "2026-10-16T21:49:28.000Z",
      "commit": "4a017db142f3da61f98a9265de1bf0a8a74ffd24",
      "fileid": "https://r2.ropensci.org/885d9b1482e52adc6fbfeccad4ae94457287d73383d8d59069d327b4cd59eb79",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bnaras/actions/runs/38971535135"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.1-9",
      "date": "2026-10-16T21:50:44.000Z",
      "commit": "4a017db142f3da61f98a9265de1bf0a8a74ffd24",
      "fileid": "https://r2.ropensci.org/9fe5504f6e6cd4cd26d684f7d1eb6f52559d21977c4f480c1282e12fd4b54776",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bnaras/actions/runs/38971535135"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.1-9",
      "date": "2026-10-16T21:49:35.000Z",
      "commit": "4a017db142f3da61f98a9265de1bf0a8a74ffd24",
      "fileid": "https://r2.ropensci.org/75ce9ac7ed4b3f0c0166fa1ae85b8d6730e0203661f6e5553c3879780ee40361",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bnaras/actions/runs/38971535135"
    }
  ]
}